February 26, 2026
There are more than 10,000 known rare diseases.
Only a fraction have approved treatments.
Behind every program is a family waiting for progress.
On Rare Disease Day 2026, Certara experts across regulatory strategy, quantitative modeling, gene therapy, real world evidence, CMC, submissions, and global health share how cross-functional innovation is accelerating rare disease drug development and transforming what’s possible for patients worldwide.
Because in rare disease drug development, integration is not optional. It’s essential.
Why Rare Disease Drug Development Requires a Different Model
Rare disease drug development is not simply traditional drug development on a smaller scale.
It means:
- Extremely small patient populations
- High variability in response
- Limited natural history data
- Ethical complexity in pediatric rare disease trials
- Expedited regulatory pathways
- Global access disparities
Every data point matters. Every patient matters.
Success requires something fundamentally different:
Cross-functional integration from day one, combining regulatory science, quantitative modeling, CMC strategy for rare diseases, and real-world evidence in rare diseases.
Expert Perspectives on Accelerating Rare Disease Drug Development
Below, our experts explain how their work is driving innovation across the rare disease lifecycle, from early regulatory strategies for rare disease through global access.
Aligning Globally: Regulatory Strategies for Rare Disease
Rare disease therapies span an extraordinary range, from repurposed small molecules to advanced gene therapy for rare diseases and individualized cell therapies.
This diversity creates both opportunity and regulatory complexity.
Effective regulatory strategies for rare diseases must account for:
- Multi-regional development requirements
- Orphan drug development incentives
- Accelerated approval pathways
- Pediatric study obligations
- Evolving rare disease regulations
Collaborative regulatory models across jurisdictions can reduce duplication and accelerate global approvals. Regulators are increasingly open to innovative endpoints, biomarkers, and modeling approaches, but alignment must begin early.
A proactive regulatory strategy for rare disease integrates modeling, CMC planning, and submission strategy well before pivotal trials begin. When done correctly, this reduces risk, supports earlier scientific advice, and strengthens global filings.
Learn more about our Regulatory Strategy Services and how early regulatory alignment accelerates rare disease drug development.
When Every Patient Counts: Regulatory Submissions in Small Populations
Rare disease clinical trials often cannot rely on large datasets or conventional statistical comparisons.
Instead, regulators may evaluate results patient by patient.
Despite these challenges, the regulatory environment has evolved significantly. Certara teams have supported more than 110 rare disease submissions across 70+ unique diseases, contributing to approvals across the US, Europe, and Japan.
Strategic submission planning, informed by modeling and aligned with rare disease regulations, ensures that small datasets can still support robust benefit-risk conclusions.
Explore our Regulatory Submissions Services.
Gene Therapy for Rare Diseases: Delivering on the Promise – Sustainably
Gene therapy for rare diseases is delivering transformative impact.
But scientific success must be matched with economic sustainability. Development costs directly influence accessibility.
Model-informed approaches can:
- Streamline rare disease clinical trials
- Reduce development time
- Support pediatric extrapolation
- Eliminate certain trials through validated simulation
These efficiencies are especially critical in rare disease drug development, where every month of delay affects small, vulnerable populations.
Learn more about our Gene Therapy Development Solutions and Clinical Pharmacology Services.
Model-Informed Drug Development in Rare Diseases: Guided by ICH M15
In rare disease drug development, trials may include only a handful of patients. Placebo arms may not be feasible. Variability is high.
Model-informed drug development in rare diseases (MIDD) is no longer supportive, it is foundational.
With the finalization of ICH M15 guidance, global standards now harmonize how models are developed and reported, reducing regulatory risk across regions and strengthening regulatory strategies for rare disease programs.
Advanced approaches include:
- Mechanistic PBPK modeling for pediatric rare disease trials
- Population PK to quantify variability in sparse datasets
- Disease progression modeling
- Digital twins to reduce placebo reliance
To learn more about implementing ICH M15 guidance in practice:
- Read: Guided by Evidence: Implementing the ICH M15 Guideline for MIDD
- Read: FAQs: The ICH M15 Guideline and What It Means for MIDD
MIDD becomes the bridge between data scarcity and clinical confidence in rare disease drug development.
You can also explore our Model-Informed Drug Development Solutions.
Expanding the Evidence: Real World Evidence in Rare Diseases
Rare diseases often lack standardized diagnostic definitions, complicating data analysis.
Yet real world evidence in rare diseases offers enormous opportunity:
- Synthetic control arms
- Comparative effectiveness insights
- Integration into pharmacometric models
- Support for regulatory and payer decisions
Regulators are increasingly formalizing RWE integration into approval frameworks, making it a key pillar of modern regulatory strategies for rare disease.
Learn more about our Real-World Evidence Solutions.
Quality at Speed: CMC Strategy for Rare Diseases Under Accelerated Pathways
Expedited pathways increase pressure on manufacturing teams, without lowering quality expectations.
A proactive CMC strategy for rare diseases must address:
- Modality-specific manufacturing complexity
- Scale-up under small batch conditions
- Global regulatory alignment
- Accelerated submission timelines
Early cross-functional collaboration and in silico modeling strengthen both quality and speed.
Explore our CMC Strategy Services.
Equity Matters: Rare Disease and Global Health
Rare diseases intersect with global disparities.
Treatments rare in high-income regions may be endemic elsewhere. Public-private partnerships and model-informed strategies have accelerated therapies for neglected diseases such as river blindness and sleeping sickness.
Scientific rigor must be paired with global accessibility to ensure rare disease drug development benefits patients worldwide.
Learn more about our Global Health Solutions.
Download the Rare Disease Drug Development White Paper
Cross-functional integration is what accelerates rare disease drug development. Download the white paper and explore these strategies in greater depth.
Inside, you’ll learn:
- How to navigate evolving rare disease regulations
- How modeling and simulation accelerate approvals
- Advanced regulatory strategies for rare disease
- Strategies for pediatric extrapolation
- Approaches to synthetic control arms and RWE
- CMC planning under expedited pathways
- Aligning global development and access
If you’re developing therapies in rare or ultra-rare indications, this guide provides a practical roadmap to accelerate your rare disease drug development program.
This Rare Disease Day 2026 – Integration Is Acceleration
Rare disease drug development has never been more promising.
But innovation without integration creates risk.
On Rare Disease Day 2026, we recognize that cross-functional strategy, grounded in regulatory science, quantitative rigor, manufacturing excellence, and global collaboration, transforms possibility into approved therapies.
Watch the perspectives. Download the white paper. And let’s accelerate rare disease drug development together.

Marcela Aleman
Marketing Director, Certara Drug Development SolutionsContact Certara


